Re: plotting measurements through a stack

Posted by Wayne Rasband on
URL: http://imagej.273.s1.nabble.com/Painting-over-the-ROI-tp3701483p3701486.html

> I am wondering if anyone has written a plug-in to plot the average (of
> a region of interest) versus slice number; and, if so, how difficult
> would it be to do the same for other measurements (std deviation etc)?
>  Could these values be output to other programs as well?

The Image>Stacks>Plot Z-axis Profile command does this. Use the
Analyze>Set Measurements command to specify other measurements such as
standard deviation. Output the values to other programs by right
clicking on the Results window and selecting "Save As" or "Copy".

-wayne