Posted by
Michael Weber-4 on
URL: http://imagej.273.s1.nabble.com/LSM-Reader-tp3701500p3701501.html
Hi Ye,
try the LSM Toolbox (see attached mail).
> Hello,
>
> I installed ImageJ 1.36b. With this package, it has LSM reader installed
> in plugin. However, when using this plugin to read LSM file, for 12 bit
> image, it will read in as 8 bit and the image looks very funny. Does every
> know about the plugin LSM reader, whether it only works for 8 bit image,
> not 12 bit? Is there any plugin available which can read 12 bit LSM
> image?
>
> Thanks
> Ye
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---------------------------- Original Message ----------------------------
Subject: LSMToolbox ver 4.0 is out! (previously LSM_Reader)
From: "Patrick Pirrotte" <
[hidden email]>
Date: Thu, September 7, 2006 18:02
To:
[hidden email]
--------------------------------------------------------------------------
Hi,
LSMToolbox version 4.0 is out!
It has evolved from the LSM_Reader which is implemented in a shortened form
in the ImageJ codebase since version 1.36b. Many of the nifty features not
available in the lightweight LSM_Reader can be found in the LSM_Toolbox.
Furthermore, I had no time to update the ImageJ integrated LSMReader yet so
it's still stuck on version 3.2g. I strongly advise you to install the
LSMToolbox as it implements the following features:
* open compressed images (YES it finally works!!!)
* compatible with the latest release of the Zeiss LSM file format (July
2006, version 4)
* compatible with 8, 12 and 16 bit LSM images
* image preview window when opening, shows first image of first image
directory from the file
* lambda t and z-stamping
* open stacks with HyperVolume_Browser OR Image5D if those plugins are
installed
* binding to LSM_Merge or LSM_Fuse if those plugins are installed
* recoloring with the Lut_Panel plugin, if the plugin is installed
* detailed view and extraction of acquisition data
* a help page
* faster than LSM_Reader version 3.2. Subjectively faster than the
native Zeiss LSM Browser ;-)
* ... many many more...
You can find the info page is here:
http://imagejdocu.tudor.lu/imagej-documenation-wiki/plugins/lsmtoolboxThe LSMToolbox can be downloaded directly from it's development site.
http://www.image-archive.org/uploads/media/LSM_Toolbox.jarPlease mail me for bugs reports / comments / wishes.
Best regards,
Patrick Pirrotte