Re: Where is result image of calculate()?

Posted by John Kim-2 on
URL: http://imagej.273.s1.nabble.com/Where-is-result-image-of-calculate-tp3701646p3701648.html

On Mon, 4 Sep 2006 23:44:57 -0700, Robert Dougherty <[hidden email]> wrote:
>I don't understand the question about running the program from the
>command line.  Is your code not an ImageJ plugin?  If you are running
>ImageJ from the command line, what difference does that make?

I was hoping to be able to run the program while logged into a machine
remotely via a text terminal. I don't know what will happen if ImageJ wants
to open an image window but there's no graphics terminal to open it in.

Also, I thought opening & closing image windows on the screen would
significantly slow down the program. I don't need to see the intermediate
images -- just the final result table.

I'm trying to count particles in (thousands of) images by:
1) subtracting out the background;
2) convert the image to 8-bit grayscale;
3) threshold it; then
4) run particle analyzer.

I see examples in the email archives about how to do one of these at a time
but not do them in series. Anyhow, thanks Bob. I'll try what you suggest....

John