Posted by
Joel Sheffield on
URL: http://imagej.273.s1.nabble.com/Section-Viewer-tp3702915p3702916.html
I know what you are referring to. It is possible to use
Image>Stacks>Reslice to present a "side view" of the edge revealed by
a line traced on the image. I would imagine that it would be
possible to draw one line, run a reslice, draw a line at right angles
and do a second reslice. One could then rotate and place all three
images in a new image frame so that they would duplicate the Leica
display. This is cumbersome, but it might be possible to write a
macro to do this.
That said, I haven't had enough experience with macros yet to try it.
Joel
Joel
Date sent: Fri, 5 May 2006 13:15:03 +1200
Send reply to: ImageJ Interest Group <
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From: Jacqui Ross <
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Subject: Section Viewer
To:
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> Dear All,
>
>
>
> I would like to be able to section a z series stack from a confocal
> microscope such that I see not only the position of the point of
> section (in xy view) but see the corresponding views on each side
> simultaneously.
>
>
>
> I have tried out the Volume Viewer which is very nice but it doesn't
> seem to be able to display the xz/xy views together with the xy.
>
>
> What I am trying to replicate a tool in the Leica SP2 software called
> Section View. It allows you to save a snapshot of the views together.
>
>
>
> If anyone can help me, it would be much appreciated. I'm happy to post
> an example (from the SP2) of what I am looking for if that helps to
> explain things better.
>
>
>
> Cheers,
>
>
>
> Jacqui.
>
>
>
> Jacqueline Ross
> Biomedical Imaging Research Unit
> Department of Anatomy with Radiology
> Faculty of Medical & Health Sciences
> The University of Auckland
> Private Bag 92019
> Auckland, NEW ZEALAND
>
> Tel: 64 9 373 7599 Ext 87438
> Fax: 64 9 373 7484
>
>
http://www.health.auckland.ac.nz/biru/> <
http://www.health.auckland.ac.nz/biru/>
>
>
Joel B. Sheffield, Ph.D
Department of Biology
Temple University
Philadelphia, PA 19122
Voice: 215 204 8839
e-mail:
[hidden email]