Re: Batch processing Z stacks + labelling them

Posted by Albert Cardona on Mar 11, 2006; 6:32pm
URL: http://imagej.273.s1.nabble.com/Batch-processing-Z-stacks-labelling-them-tp3703431p3703432.html

Andy,

What you want to do is very straightforward with a java plugin, and just as
complex as the macro you wrote. Then you can call the plugin from a
'RunMacro' and execute it without displaying the ImageJ GUI. Or, just call
the plugin directly from the command line and use ImageJ as a library to open
and edit your images.

Albert

--
Albert Cardona
Molecular Cell Developmental Biology
University of California Los Angeles
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