Posted by
No Name-4 on
Jan 19, 2006; 2:50pm
URL: http://imagej.273.s1.nabble.com/Converting-a-stack-to-a-montage-tp3704011p3704013.html
Wayne,
Is ImageJ 1.35m available? The most recent version that I see is 1.35l. I
would love to have the ability to select the border and text color. Right
now, my workaround is to make a duplicate image of the montage, threshold
to create a black 'border only' image and do Image Calculator to AND the
images.
Thanks,
Jim Deeds
Wayne Rasband <
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Sent by: ImageJ Interest Group <
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01/18/2006 03:48 PM
Please respond to ImageJ Interest Group
To:
[hidden email]
cc: (bcc: James Deeds/PH/Novartis)
Subject: Re: Converting a stack to a montage
> I am attempting to convert a group of 5 image stacks into a
> 2-column, 3-row montages. I have the border set to 3 as
> well. I am encountering a bit of inconsistency in how the
> montage is made with regard to the empty spot in the lower
> right corner. At times, the montage has a white lower right
> corner and the borders are black. This is the way I would
> like it. At other times the lower right corner is black and
> the borders are white. Is there a way to force some kind of
> consistent behavior? I have a plugin that I have written to
> assemble about 150 of these montages but if they are not
> consistent it will still create a lot of hand work.
>
> What determines the border and blank space behavior as far
> as color choices made by the program?
With 16 and 32 bit images, Image>Stacks>Make Montage always draws white
borders and labels and fills unused areas with black. With 8 bit and
RGB images, it draws in white and fills with black if the median pixel
value of the first slice is less than 200, otherwise it draws in black
and fills with white. With ImageJ 1.35m and later, there is an option
to draw in the foreground color and fill with the background color.
-wayne