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Re: opening stacks

Posted by Richard Murray-3 on Oct 19, 2005; 3:45pm
URL: http://imagej.273.s1.nabble.com/opening-stacks-tp3704634p3704638.html

You'll either need to rename your files numerically or get the 'xp-style'
image j


> Morgiane,
>
> I think you need "XP-style" file ordering, i.e. a consecutive sequence
> of digits is treated as numbers and the files are sorted by these
> numbers. Actually, on my PC running Windows XP a file sequence like you
> describe opens correctly in ImageJ.
> You might try the HyperVolume Opener, which is one of the plugins in the
> Image5D plugin collection, available from the ImageJ website. I
> explicitly implemented this type of file sorting in the plugin, so it
> should also work on other operating systems.
>
> Joachim
>
> M.Richard schrieb:
>> Dear ImagJer,
>>
>> I want to import a sequence of tiff images, which names start with a
>> string and then a number, that is to say: "string1.tiff",
>> "string2.tiff", etc... The problem is ImageJ import the files as a
>> sequence, but in the following order: "string1.tiff",
>> "string10.tiff"...."string19.tiff", "string2.tiff", etc... I dont
>> know how to impose the order of teh sequence. I have tried to put an
>> increment of 11 in the dialog box and 99 images as the total number
>> of images to be opened, but then only the first 9 images are opened.
>>
>> Thank you,
>>
>> Morgiane
>>
>>
>
>
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> -----------------------------------------------
> Dr. Joachim Walter
>
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--
Richard Murray BSc.
Nanoscale Biophotonics Research Group,
NCBES, Orbsen Biulding,
NUI Galway
Galway,
Ireland
email: [hidden email]
phone:00353-87-7734313