Re: Opening a File with ImageJ - Exception message

Posted by ctrueden on Apr 04, 2012; 5:55pm
URL: http://imagej.273.s1.nabble.com/Opening-a-File-with-ImageJ-Exception-message-tp4687152p4687272.html

Hi Carlos,

An exception message appears when I try to open a particular tif file with
>
 ImageJ. It is an image of 16Mb in size.
>

Depending on the file format, a different plugin will be used to open. So
it is not clear which plugin is emitting the error message you are seeing.

Did you try opening with the Bio-Formats Importer plugin?

If you install the Fiji distribution of ImageJ (http://fiji.sc/)
Bio-Formats is bundled with it. Otherwise, you can download it yourself:
http://loci.wisc.edu/bio-formats/imagej

Using Bio-Formats, you should at least get a more informative error message
if there is a problem. Feel free to reply back to the list with more
details if you continue to have trouble.

Regards,
Curtis


On Wed, Apr 4, 2012 at 12:06 PM, Carlos Alberto Perez <[hidden email]> wrote:

> Hello everyone,
>
> An exception message appears when I try to open a particular tif file with
> ImageJ. It is an image of 16Mb in size. O popup window appears with the
> following message:
>
>
>
> “java.lang.ArrayIndexOutOfBoundsException”
>
>
>
> Does anyone may explain me what kind of problem is this and if I can fix
> it.
>
> Thank you in advance
>
> Carlos.
>
>
>
> Carlos A. Pérez, PhD
>
> X-Ray Fluorescence and Absorption Group
>
> LNLS -Brazilian Synchrotron Light Source Laboratory
>
> http://www.lnls.br
>
> Phone: [phone]
>
> Fax: [phone]
>
> Mail address:
> Caixa Postal 6192
> CEP 13083-970
> Campinas - SP, Brazil
>
>
>
>
>