Re: StackReg or similar

Posted by Rainer M. Engel on
URL: http://imagej.273.s1.nabble.com/StackReg-or-similar-tp5000226p5000243.html

Am 27.09.2012 18:44, schrieb Rainer M. Engel:

> Hello everyone,
>
> I have a filtered stack which works very nice with StackReg, but in
> addition to a well aligned stack I would like to get the used
> transformations (in modes transform and rigid i.e.).
> My focus lies only on the position offsets.
>
> Something like verbose to log would be fine.
>
> If not possible, is there another way to get these values?
>
> Thanks for time.
>
> Regards,
> Rainer
>
>

I made some tests. If anybody is interested.

ZIP-ARCHIVE:
https://dl.dropbox.com/u/414433/imagej/aligning.zip

It Contains:
- s03_SOURCE.tif
- s03_StackReg.tif (very fast and good)

(not good/fast enough (maybe there are to me unknown tweaks))
- s03_ImageStabilizer.tif
- s03_RegVirtualStacks_Rigid.tif
- s03_RegVirtualStacks_Transformation.tif


I think there are purposes, when the actual registration with its
sampling is not needed and could be disabled to only get transformation
data for speed reasons.

Regards,
Rainer


--
Rainer M. Engel, Dipl. Digital Artist
scientific|Media GbR
Pichelsdorferstr. 143
D-13595 Berlin

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html