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using ImageJ as image viewer from inside R

Posted by Christian Tischer on Oct 27, 2012; 5:42pm
URL: http://imagej.273.s1.nabble.com/using-ImageJ-as-image-viewer-from-inside-R-tp5000557.html

Hey,

i'd basically like to use ImageJ as an ImageViewer from within R.

i am wondering how to do this best.

i guess i could

1) use rJava to directly access IJ classes or
2) send a system command such as "fiji.exe openImage.py myImage.tif", where
myImage.tif would be an input parameter to the jython script, or
3) ???

in any case i don't know how i can ensure that the currently opened
instance of IJ is used for showing the images?
i don't want for each image a new ImageJ to open as this would be rather
slow an annoying.

any suggestions?

thanks!
Tischi

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