Re: Color Counter

Posted by NatyC on Nov 05, 2012; 7:47pm
URL: http://imagej.273.s1.nabble.com/Color-Counter-tp5000650p5000683.html

Dear Ms. Jacqui Ross,

How does splitting the channels and then adjusting the threshold make
it simpliar for me the quantify the blue?
All I'm getting are split channels and then the threshold box indicating 0-233.
Is the 233 the quantifying of my color?
Please advise!

Thanks,
Natalia

On 11/2/12, Jacqui Ross <[hidden email]> wrote:

> Hi Natalia,
>
> How about trying the plugin Threshold Colour instead? You can select based
> on hue and can try different colour spaces.
>
> Or if you really just want to count "blue", the easiest way is to split the
> channels (Image - Color - Split Channels) and quantify the "blue image using
> Image - Adjust threshold.
>
> If it's a histology image (e.g. H & E), you could also try the Colour
> Deconvolution plugin. It splits out the images based on vectors for each
> stain.
>
> Kind regards,
>
> Jacqui
> ________________________________________
> From: ImageJ Interest Group [[hidden email]] on behalf of Natalia
> Chacon [[hidden email]]
> Sent: 03 November 2012 08:28
> To: [hidden email]
> Subject: Color Counter
>
> Hello Everyone,
>
> I'm currently using Color Counter to anaylze an image of mine.
> I'm having some issues with selecting the "unique color" that the
> plugin claims it can quantify.
>
> Does anyone have any clue how I can select a specific color so that
> the plugin can count the number of pixels in my image?
>
> *Note, I'm just trying to quantify the color blue in my light microscope
> image.
>
> Thanks,
> Natalia
>
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