Recommended Sholl Analysis Plugin?

Posted by aavery on
URL: http://imagej.273.s1.nabble.com/Recommended-Sholl-Analysis-Plugin-tp5001394.html

Hi Everyone,
 
I am looking for an ImageJ plugin to perform Sholl analysis on neuron dendritic arbors.  I have heard that ImageJ can be used for this type of analysis.
 
I found an ImageJ plugin called "Sholl analysis" at
 
http://imagejdocu.tudor.lu/doku.php?id=plugin:analysis:asa:start
 
This plugin was developed by Tiago Ferreira and Tom Maddock and it looks like it would do the job nicely.  I have even found in the listserve archive questions from users of this plugin, and these questions were answered by Tiago Ferreira.  However, I cannot find the jar or class file for this plugin.  If anyone knows if it exists and/or where to locate the plugin file, please let me know.  I could not find a jar file download at the page listed above.
 
Other plugins I have come across:
 NeuronJ: can trace neurons but does not appear capable of Sholl analysis.
 Simple Neurite Tracer: appears capable of Sholl analysis but is listed as a Fiji plugin.  Can a Fiji plugin be run on ImageJ?
 
Any help for this ImageJ newbie would be appreciated.
 
Thanks!
Adam


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