Re: FIJI update site setup issues on windows

Posted by Unruh, Jay-2 on
URL: http://imagej.273.s1.nabble.com/FIJI-update-site-setup-issues-on-windows-tp5001543p5001548.html

Very nice, I was wondering how to enter the console mode from FIJI.

Here is the error message I get:

Found 297 plugins.
Created service: imagej.thread.DefaultThreadService
Created service: imagej.event.DefaultEventService
Created service: imagej.plugin.DefaultPluginService
Found 3 upload mechanisms.
com.jcraft.jsch.JSchException: failed to send channel request
        at com.jcraft.jsch.Request.write(Request.java:65)
        at com.jcraft.jsch.RequestSftp.request(RequestSftp.java:47)
        at com.jcraft.jsch.ChannelSftp.start(ChannelSftp.java:190)
        at com.jcraft.jsch.Channel.connect(Channel.java:200)
        at com.jcraft.jsch.Channel.connect(Channel.java:144)
        at imagej.updater.ssh.SFTPOperations.<init>(SFTPOperations.java:74)
        at imagej.updater.ssh.SFTPFileUploader.login(SFTPFileUploader.java:76)
        at imagej.updater.core.FilesUploader.login(FilesUploader.java:339)
        at imagej.updater.gui.UpdaterFrame.upload(UpdaterFrame.java:828)
        at imagej.updater.gui.UpdaterFrame$7$1.run(UpdaterFrame.java:343)

Can I force it to use one of the alternative upload mechanisms?  I also don't understand why it is finding 297 plugins.  I should have less than 100.  Perhaps it is not reading the plugins.config?

Thanks,
Jay

-----Original Message-----
From: Johannes Schindelin [mailto:[hidden email]]
Sent: Friday, January 25, 2013 11:30 AM
To: Unruh, Jay
Cc: [hidden email]
Subject: Re: FIJI update site setup issues on windows

Hi Jay,

On Fri, 25 Jan 2013, Jay Unruh wrote:

> I am finally in the process of setting up my own update site and am
> running into some problems.  I followed the instructions on the wiki
> (http://fiji.sc/wiki/index.php/How_to_set_up_and_populate_an_update_si
> te) using the sftp modality.  FIJI is able to recognize the web
> address and placed the blank db.xml.gz there correctly.  When I go to
> upload my jar file, the program recognizes the jar and dependencies as
> it should, but after clicking upload to server and entering my
> password, nothing happens.  I don't get any error messages.  My upload
> is only 1.5 MB, so I wouldn't expect a long lag time.  I clicked Apply
> changes and it replies that the update was successful, but nothing
> uploads and upon restart, my jar is still listed as a local-only file.
>
> Are there ways to debug this process?  Debug mode didn't give me any
> added info.  I am on a windows 7 64-bit machine.  My desired update
> site is here:
>
> http://research.stowers.org/imagejplugins/updates
>
> Any suggestions would be appreciated.

I suspect that there are some exceptions on the console. Could you try the steps described in http://fiji.sc/Console_Debugging to make them visible, please?

Ciao,
Johannes

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