http://imagej.273.s1.nabble.com/how-can-I-call-execute-run-a-trained-weka-classifier-from-an-ImageJ-macro-tp5001668p5001669.html
> Hi everybody!
>
> What I am trying to do is to classify an image using a trained WEKA model.
> I am well aware of the existence of the Advanced Weka Segmentation plugin
> of ImageJ/Fiji, but I am using a custom-made feature vector, which will not
> work with it.
>
> Anyway, within an ImageJ macro I am trying to execute:
>
> exec("java", "-cp", "/home/dionysis/weka-3-7-7/weka.jar",
> "weka.classifiers.trees.RandomForest", "-T",
> "/home/dionysis/Desktop/CNH/cnh-data/2class-deffeat-data-20121218.arff",
> "-l",
> "/home/dionysis/Desktop/CNH/cnh-data/2class-deffeat-ranfor-classifier-20121218.model.model",
> "-p", "0", ">", "/home/dionysis/Desktop/testrun-data.out");
>
> which in essence is running the terminal command for weka. In the linux
> terminal this is running fine, however, calling it within the macro it
> doesn't do anything. It does not even produce an error.
>
> In the beginning, I thought the problem was that I was trying to run a
> java program on the system's JVM called from a java program running on a
> different JVM (ImageJ/Fiji are bundled with their own JVM). For this
> reason, I tried running ImageJ/Fiji using the system's JVM, but no luck.
>
> I am also considering using the embedded weka of the Advanced Weka
> Segmentation plugin through the call() macro function, but I do not know
> how to proceed.
>
> Does anybody have any hints on this? I would greatly appreciate it...
> Thanks!
>
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-------------------------------------------------------------*Dr. Kota Miura*
Meyerhofstr. 1