Re: TrakEm2 Problems

Posted by Albert Cardona-2 on
URL: http://imagej.273.s1.nabble.com/TrakEm2-Problems-tp5002047p5002060.html

2013/3/7 OliverB <[hidden email]>

> Hi
>
> We are using TrakEm2 to reconstruct 3D images of olfactory glomeruli from
> in
> vivo imaging data. We discovered a possible bug; whenever we save a project
> as XML file, the program disconnects the first and last points along
> 'profile lines' that we use to draw the outline of our tissue. When we
> re-open the project all profile lines are interrupted along a fairly
> straight line (see crack in attached image).
>
> We are also wondering if anyone known of an easy way to fill or 'cap'
> profiles so that they don't look like empty barrels in 3D projections (see
> holes in attached image)?
>
> Any advice would be greatly appreciated.
>
> <http://imagej.1557.n6.nabble.com/file/n5002047/FIJI_Issues_%231.jpg>
>
>
>



Hi Oliver,

will try to look at it as soon as I can. Give me a few days.

Would be nice as well if you file this as a bug in the Fiji bug tracker:
http://fiji.sc/wiki/index.php/Report_a_Bug

Best,

Albert


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http://www.ini.uzh.ch/~acardona/

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