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Re: VSI Reader, new version

Posted by Jerome Mutterer-3 on Mar 08, 2013; 2:11pm
URL: http://imagej.273.s1.nabble.com/VSI-Reader-new-version-tp5002009p5002062.html

Dear all,
I've updated the ActionBar plugin so that action bars now can be
distributed as single jar files (examples on the wiki site). This makes
them compatible with Fiji update sites.

The latest version of ActionBar can be obtained from:
http://imagejdocu.tudor.lu/doku.php?id=plugin:utilities:action_bar:start#downloads

Jerome


On 5 March 2013 17:14, Burri Olivier <[hidden email]> wrote:

> Dear List,
> We've made a few updates to the reader for Olympus VSI Files
> For the more info and documentation, please visit
> http://biop.epfl.ch/INFO_completed_projects.html#vsi-reader
> Updates include:
>
>
> -          Proper bit depth is taken when downsampling images.
>
>
> -          We can now fairly accurately read labels, masks, overview scans
> from the images. This is still based on empirical formulas to recognize
> which files are which, so if you have some troublesome files, feel free to
> let us know. When the great team at BioFormats manages to parse the
> metadata from the SVI files directly, we'll make sure to modify our macro
> accordingly.
>
>
> -          We've added an Update Site for our platform containing the
> macro, as per Johannes's suggestion.
> host: http://biop.epfl.ch/Fiji-Update,
> Latest versions will still be available through our website as .zip
> downloads, but if you want to keep up with the latest modifications, you
> can add an update site for our platform to the Fiji Updater, see
> instructions at
> http://fiji.sc/wiki/index.php/How_to_follow_a_3rd_party_update_site
> The only issue we have is regarding the icons used for the actionbar
> buttons: There is an incompatibility between Fiji's Updater and the
> ActionBar plugin that does not allow for the upload of the icons to the
> update site. In the meantime, you can get the icons separately on our
> website if you really want them :). Note that once the icons are installed,
> the update site is enough, as the only thing that will change is the .ijm
> file.
>
> -          So far we've had no more issues with the latest LOCI
> installations so hopefully this is a thing of the past and it should run
> 'out of the box'.
>
> All the best,
>
> Oli
>
>
> Olivier Burri
> Engineer - Image Processing
> & Software Development
> EPFL - SV - PTECH - PTBIOP
>
>
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> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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