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Re: Average several image stacks

Posted by justin.senseney on May 14, 2013; 8:21pm
URL: http://imagej.273.s1.nabble.com/Average-several-image-stacks-tp5002995p5003004.html

Bailey,

I'm sorry, let me be more clear, Fiji is a child program of ImageJ, it takes ImageJ and adds more pieces on top of it, like the Image Expression Parser.  You can download it here: http://fiji.sc/Fiji 

As you become more familiar with ImageJ, you may want to learn about the macro language, which is accessible in Plugins->Macro->Record...  The image calculator you used prints out as imageCalculator("Add create", "A","B"); so that if you would like to set up an automated function for generating averages, you could do it using successive imageCalculator operations.

-Justin Senseney
________________________________________
From: babs_18_137 [[hidden email]]
Sent: Tuesday, May 14, 2013 1:36 PM
To: List IMAGEJ
Subject: Re: Average several image stacks

Hi Justin,

Thanks for the advice. I am a new user to ImageJ and am struggling a bit
with navigating. In my process menu, there is no Fiji or image expression
parser and I can't find these functions anywhere when I search the ImageJ
manual or plug-in list. Where am I going wrong.

Thanks again for your help.

-Bailey



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