Re: Computer for high resolution image stack analysis

Posted by José María Mateos on May 31, 2013; 11:29am
URL: http://imagej.273.s1.nabble.com/Computer-for-high-resolution-image-stack-analysis-tp5003166p5003168.html

On 31/05/2013 13:07, Abigail Nunn wrote:
> I wondered if anyone could provide me with some advice about how to choose
> a new computer for use in imaging.  I have some experience of using Fiji to
> process nonlinear microscopy image stacks, and I have noticed that the 3D
> Object Counter does not run on most of the computers I have tried,
> including a 16 GB RAM computer, for high resolution stacks (2048x2048x30).
> I have also had problems running the PureDenoise plugin with stacks of this
> size.

Have you tried processing your data as a Virtual Stack? I understand
that this option allows ImageJ to open very big stacks but does not need
to store all the data into memory.

Best,

José María Mateos.

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