Re: obtaining the slice with the maximum intensity

Posted by Justin Senseney on Jul 20, 2013; 5:00pm
URL: http://imagej.273.s1.nabble.com/obtaining-the-slice-with-the-maximum-intensity-tp5004051p5004054.html

Hi Eri,

From the main ImageJ menu, try Image->Stacks->Tools...->Grouped Z
Project... and use the Maximum Intensity projection method. Though that
doesn't tell you which slice these intensity values were located at, does
that help?

-Justin Senseney


On Sat, Jul 20, 2013 at 12:12 PM, Eri <[hidden email]> wrote:

> Every stack of images/slices that I have, always has an image (it may be
> two)
> that has the highest number of counts per pixel, not specifically a region
> of interest but the whole image. What I want is to somehow find this image
> and then extract it from the stack. I hope you understand now what I mean!
>
>
>
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