Re: Problems with TrakEM2 after Fiji update Aug 5th 2013

Posted by dscho on Aug 08, 2013; 2:50am
URL: http://imagej.273.s1.nabble.com/Problems-with-TrakEM2-after-Fiji-update-Aug-5th-2013-tp5004316p5004346.html

Hi Luisa,

On Tue, 6 Aug 2013, Johannes Schindelin wrote:

> On Mon, 5 Aug 2013, Luisa de Vivo wrote:
>
> > I'm using TrakEM2 to segment different objects in a stack of images.
> >
> > Everything was working fine up to today Aug 5, 2013 when I updated
> > Fiji (Windows 64bit), as I do almost everyday.  Now I cannot change
> > the color of the new area lists I create. Everything else is working,
> > but for me is very convenient to have different color for the area
> > lists. This seems a bug related to the update because the problem is
> > gone If I install the life-line version of July 15.
> >
> > I just thought you might want to know and try to fix this issue
> > otherwise it will be impossible for me and other TrakEM2 users to
> > download the later updates of fiji.
>
> Thank you for the bug report. I would like to ask you to help by
> assisting me in tracking down this bug: may I ask you to follow these
> instructions to obtain the command-line output?
>
> http://fiji.sc/Debugging#Windows_.26_Linux

Thank you for the output (which you sent to me personally to avoid
cluttering the list) and for letting me work on your computer for two
hours (because I could still not make heads nor tails from the console
log).

It turns out that some debugging code I put into ij.jar in order to test
something locally crept into the version I uploaded to the update site
yesterday [*1*]. Re-uploading 1.48a from the fresh version provided by
Jenkins/Maven fixed the problem (and I will be more careful in the
future... ;-).

Thank you again, was great meeting you!
Johannes

Footnote *1*: For interested lurkers: a subtle bug bit me where the Java
compiler inlined IJEventListener.FOREGROUND_COLOR_CHANGED into the
compiled ij.gui.Toolbar class and failed to recompile said class when I
changed the constant back to 0 (from 0xcafebabe for testing purposes).

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