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Re: Kalman Stack Filter in FIJI

Posted by dscho on Sep 05, 2013; 5:26pm
URL: http://imagej.273.s1.nabble.com/Kalman-Stack-Filter-in-FIJI-tp5004612p5004688.html

Hi Kira,

thanks for responding, but I would like to encourage you to maintain open
communication, i.e. keep the mailing list informed.

On Wed, 4 Sep 2013, Lathrop, Kira L wrote:

> From: Johannes Schindelin [mailto:[hidden email]]
>
> > On Thu, 29 Aug 2013, Lathrop, Kira L wrote:
> >
> > > I've been using the Kalman Stack Filter very successfully on an
> > > older version of FIJI, but am not able to use it in the current
> > > version.  There were two versions of that plugin, one that opens the
> > > image files as needed, another that acts on an open image stack,
> > > which is the one that is built into all my macros. Is anyone else
> > > having this problem?
> >
> > I suspect that Fiji gave you additional (possibly very
> > technical-looking) information. Would you please share that with us?
>
> Not a peep out of FIJI, but Vytas Bindokas at UChgo was kind enough to
> send this version and believes the problem occurred due to the way Fiji
> added the open-as-needed code into the image/stacks menu.

Unfortunately, the attached .class file is not a good fix: it completely
hides the source code, which is all the more unfortunate since the
original was Open Source. Also, I still do not have any proper information
what went wrong. So I cannot use it or benefit from it in any way.

Thanks,
Johannes

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