Login  Register

Segmentation Problem

Posted by Pascal Lorentz-2 on Oct 02, 2013; 11:53am
URL: http://imagej.273.s1.nabble.com/Segmentation-Problem-tp5005009.html

Dear List

I got this Image of muscle fiber (Fiber-I white and Fiber-II red) from a
user:

http://www.picfront.org/d/91MZ

She wants to compare white versus red cells. She needs the percentage of
cells (white vs red) but only cells that have a circularity between 0.6
and 0.8 should be considered. Truncated cells should be excludes as
well.  I am able to seperate white and red cells but just area wise. I
would be glad if anybody as a good procedure to segment the single cells
(if possible at all).

Thanks a lot for your help

Pascal

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html