Re: Pls help me with segmentation issue to count cell colonies in 3D agars.

Posted by ctrueden on Oct 07, 2013; 3:47pm
URL: http://imagej.273.s1.nabble.com/Pls-help-me-with-segmentation-issue-to-count-cell-colonies-in-3D-agars-tp5004983p5005071.html

Hi Peter,

> I wish there would be a link to some background information on this
> topic. And more a kind of "Do's and Dont's in Scientific Imaging"
> where beginners could be guided to and where they can find the most
> relevant and important info in short.

There is the start of such a page on the Fiji wiki:
    http://fiji.sc/IP_Principles

Feel free to edit and flesh out to your heart's content!

Regards,
Curtis


On Mon, Oct 7, 2013 at 4:40 AM, Johannes Schindelin <
[hidden email]> wrote:

> Hi Peter,
>
> On Sun, 6 Oct 2013, Peter Haub wrote:
>
> > I wish there would be a link to some background information on this
> > topic. And more a kind of "Do's and Dont's in Scientific Imaging" where
> > beginners could be guided to and where they can find the most relevant
> > and important info in short.
> >
> > Do you have anymore idea beside the very nice books of Burger&Burge (
> > http://imagingbook.com ) and also Peter Bankhead (
> >
> http://blogs.qub.ac.uk/ccbg/files/2013/06/Analyzing_fluorescence_microscopy_images.pdf
> > ), where the aspects of jpeg compression is described?
>
> I also like to point to
> http://www.uab.edu/researchintegrityandimages/guidelines/list.html and
> http://alvyray.com/Memos/CG/Microsoft/6_pixel.pdf (and I also like to
> point out that scientific images are not, in fact, photographs:
> http://www.4p8.com/eric.brasseur/gamma.html)
>
> Ciao,
> Johannes
>
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>

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