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Re: Create rotational slices of an image

Posted by Herbie-3 on Oct 22, 2013; 8:53am
URL: http://imagej.273.s1.nabble.com/Create-rotational-slices-of-an-image-tp5005252p5005265.html

Good day non-name,

once more it turns out that it is really helpful to know what someone is
"really trying to achieve".

Now that we know a bit more about the goal, I fully agree with Karsten
that you should give the "Polar Transformer"-plugin a try. It transforms
concentric circles into straight lines, i.e. imperfect circles into
wiggly lines. In the transformed image you can then project rectangular
selections in order to obtain measures for the local/regional deviation
from a perfect circle...

Best

Herbie

_________________________________
On 22.10.13 07:14, Karsten wrote:

> Hi,
>
> if I don't misunderstand you, you are seemingly looking for a
> cartesian-polar transformation. Why not give it a try, something like
> "Polar-Transformer" plugin?
>
> Regards Karsten
>
> Am 19.10.2013 um 21:54 schrieb madtrick <[hidden email]>:
>
>> Hi,
>>
>> Thanks for your reply!
>>
>> What I'm really trying to achieve is to use the radial profile
>> plugin to determine how 'wavy' the outer circle is at particular
>> points. However, as the plugin only gives an overall profile of the
>> entire circle I am trying to create a sector per slice in a stack
>> for the plugin to analyse individually.
>>
>> What you mentioned sounds perfect, but I am new to imageJ and I
>> was wondering if you could push me in the right direction of how to
>> turn polygon selections into slices using a macro?
>>
>> Many thanks!
>>
>>
>>
>> -- View this message in context:
>> http://imagej.1557.x6.nabble.com/Create-rotational-slices-of-an-image-tp5005252p5005255.html
>>
>>
Sent from the ImageJ mailing list archive at Nabble.com.
>>
>> -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>
> Karsten [hidden email]
>
> -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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