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Re: Macros for Colour Deconvolution plugin - saving multiple files

Posted by Jacqueline Ross on Oct 31, 2013; 10:29pm
URL: http://imagej.273.s1.nabble.com/Macros-for-Colour-Deconvolution-plugin-saving-multiple-files-tp5005383p5005411.html

Hi Gabriel,

It's a modified Picro Sirius red/ light Fast green combination. Shows collagen in red and everything else is green. The collagen can also be viewed with polarised light.

One of our researchers developed it based on one by John Kiernans in Canada. Works well.

Cheers,

Jacqui

Jacqueline Ross
Biomedical Imaging Microscopist
Biomedical Imaging Research Unit 
School of Medical Sciences 
Faculty of Medical & Health Sciences
The University of Auckland
Private Bag 92019
Auckland 1142, NEW ZEALAND

Tel: 64 9 923 7438
Fax: 64 9 373 7484

http://www.fmhs.auckland.ac.nz/sms/biru/

-----Original Message-----
From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of Gabriel Landini
Sent: Thursday, 31 October 2013 10:08 p.m.
To: [hidden email]
Subject: Re: Macros for Colour Deconvolution plugin - saving multiple files

On Thursday 31 Oct 2013 03:20:49 you wrote:
> just replace the line for the vectors that we use ("vectors=[User
> values] show [r1]=60.27969 [g1]=15.12007 [b1]=14.169498 [r2]=53.738953
> [g2]=114.16744 [b2]=106.36251 [r3]=1.4947393 [g3]=7.050659
> [b3]=12.738025");) with your own choice.

Just curious, what stain is that?

Regards

Gabriel

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