http://imagej.273.s1.nabble.com/linear-translation-of-stack-tp5005448p5005473.html
> Hi Arvid,
>
> this is a usual problem in this mailing list: The mailer has introduced a
> line break in a long line. ImageJ macro statements cannot extend over
> multiple lines, however.
> The following should be one line (I write it as one line, but the mailer
> may introduce a line break again...)
> run("Translate...", "x="+i*xTranslate+" y="+i*yTranslate+"
> interpolation=None slice");
>
> Please note that there should be a space between the quotes and the word
> interpolation.
>
> Michael
> ________________________________________________________________
> On Nov 5, 2013, at 23:20, rosteu wrote:
>
> > hi again,
> >
> > thanks for a quick response, I'm suspecting that I might have installed
> the
> > macro in the wrong way or something, when I run it I get:
> >
> > ')' expected in line 13
> > <interpolation> = none slice ");"
> >
> > and no translation of my stack of about ~100 images (2x1k pixels).
> >
> > the debug window says:
> >
> > FreeMemory() 496MB of 14991MB (3%)
> > nImages() 1
> > getTitle() "tif"
> > xTranslate 1
> > yTtranslate 0
> > i 1
> >
> > I didn't want to ask about it until I read up a bit on macros to see if I
> > did something wrong, but now that you asked, this is as far as I've
> gotten..
> >
> > (I'm using FIJI (ImageJ 1.48a) and Java 1.6.0_65 (64-bit) on a macbook
> pro
> > running OS X 10.9)
> >
> > /arvid
> >
> >
> > On Tue, Nov 5, 2013 at 9:10 PM, George Patterson-2 [via ImageJ] <
> >
[hidden email]> wrote:
> >
> >> Hi Arvid,
> >> What's the problem/error?
> >> I ran a quick little test on a stack of ~100 images before sending and I
> >> thought it worked fine.
> >> George
> >>
> >>
> >> On Tue, Nov 5, 2013 at 2:56 PM, rosteu <[hidden email]<
>
http://user/SendEmail.jtp?type=node&node=5005460&i=0>>
> >> wrote:
> >>
> >>> Thank you so much George, I haven't gotten it to work yet, but I'm
> >> trying
> >>> to figure it out - it's exactly what I need!
> >>> /Arvid
> >>>
> >>>
> >>> On Tue, Nov 5, 2013 at 5:05 PM, George Patterson-2 [via ImageJ] <
> >>> [hidden email] <
http://user/SendEmail.jtp?type=node&node=5005460&i=1>>
> >> wrote:
> >>>
> >>>> Hi Arvid,
> >>>> The little macro below should do the trick.
> >>>> In ImageJ, just open a text window and paste into the window. In
> >> Fiji,
> >>>> open a new Script, select ImageJ macro as the language and paste the
> >> text
> >>>> into the window.
> >>>> Edit the xTranslate and yTranslate as necessary. Open your stack and
> >> Run
> >>>> Macro.
> >>>> FYI, if you go to Plugins>Macros>Record, you can find the commands to
> >> run
> >>>> ImageJ's functions and put these into a simple macro. For your
> >> purposes,
> >>>> it just needed to be put into a loop to run through the stack and
> >> edited
> >>>> to
> >>>> use n, 2n, 3n, etc.
> >>>> George
> >>>>
> >>>>
> >>>>
> >>>> //Stack needs to be open
> >>>>
> >>>> xTranslate=1;
> >>>> yTranslate=0;
> >>>> /*Translate a stack of images so that the first image is moved n
> >>>> pixels in the X direction, the second moved 2n pixels, the third 3n
> >>> pixels
> >>>> and so on..
> >>>> the variable "n" is represented by xTranslate and yTranslate
> >>>> */
> >>>>
> >>>>
> >>>> for(i=1;i<=nSlices;i++){
> >>>> setSlice(i);
> >>>> run("Translate...", "x="+i*xTranslate+" y="+i*yTranslate+"
> >>>> interpolation=None slice");
> >>>> }
> >>>>
> >>>>
> >>>>
> >>>>
> >>>> On Mon, Nov 4, 2013 at 6:17 PM, rosteu <[hidden email]<
> >>>
http://user/SendEmail.jtp?type=node&node=5005453&i=0>>
> >>>> wrote:
> >>>>
> >>>>> hi,
> >>>>> I'm new, so please forgive me if this is a stupid question:
> >>>>>
> >>>>> I want to translate a stack of images so that the first image is
> >> moved
> >>> n
> >>>>> pixels in the X direction, the second moved 2n pixels, the third 3n
> >>>> pixels
> >>>>> and so on..
> >>>>>
> >>>>> the tool image>transform>translate does exactly what I need, but
> >> each
> >>> of
> >>>> my
> >>>>> experiments contains >1000 images in a stack, so doing it manually
> >> for
> >>>> each
> >>>>> image isn't really an option..
> >>>>> I don't need any fancy content based registration, only a simple
> >>>>> progressive
> >>>>> linear movement of each slice where I can specify how many pixels
> >> the
> >>>>> images
> >>>>> will be moved per slice.
> >>>>>
> >>>>> any ideas much appreciated!
> >>>>> arvid
> >>>>>
> >>>>>
>
>
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