TrackEM2: export areaLists to .tiff

Posted by Kevin Keraudren on Dec 05, 2013; 9:50am
URL: http://imagej.273.s1.nabble.com/TrackEM2-export-areaLists-to-tiff-tp5005817.html

Hi,
I created a project in TrackEM2, defined the "Project Objects" and drew
the areaLists. Now I would like to use "AreaLists as labels (tif)" so
that I can save the segmentation and use it outside of ImageJ, for
instance with a Python or Matlab script.
How can I get the correspondence between the labels in the tiff image
and the hierarchical organisation created in Project objects? How can I
know that label-1 is cytoplasm-1, label-2 is nuclei-1, label-3 is
background, label-4 is cytoplasm-2 and so on?
Thanks for your help,
Kind regards,
Kevin

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