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Re: Average intensity along concentric circles

Posted by Michael P Ellis on Jan 21, 2014; 3:02pm
URL: http://imagej.273.s1.nabble.com/Average-intensity-along-concentric-circles-tp5006193p5006202.html

If your bands are too narrow, you may fall foul of significant aliasing errors, i.e. having a non-negligble number of pixels counted  in more than one band.

You are welcome to use the Domain Analysys macros if they are of any use to you

http://www.dsuk.biz/DSUK/ImageJ_Support.html




On 21 Jan 2014, at 14:52, "Cammer, Michael" <[hidden email]> wrote:

> Convert each circle to a band one pixel wide and measure.
>
> ===========================================================================
> Michael Cammer, Microscopy Core & Dustin Lab , Skirball Institute, NYU Langone Medical Center
> Cell:  914-309-3270   Lab: 212-263-3208
> http://ocs.med.nyu.edu/microscopy & http://www.med.nyu.edu/skirball-lab/dustinlab/
>
>
> -----Original Message-----
> From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of moxed
> Sent: Monday, January 20, 2014 4:33 PM
> To: [hidden email]
> Subject: Average intensity along concentric circles
>
> Hello, I was wondering if anyone could help me figure out a way to take the average pixel intensity along a high number of concentric circles (~100).  
>
> I know the Concentric Circle plugin will let me overlay concentric circles on the image... but is there anyway to get the average intensity along/around the perimeter of each of these circles?
>
> Thank you!
>
>
>
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