Posted by
Cammer, Michael on
Jan 28, 2014; 2:44pm
URL: http://imagej.273.s1.nabble.com/Annular-ROI-and-profile-plot-tp5006314p5006320.html
Is this what you need? Does not go all the way to the center, however. Also, thanks to many new commands added to ImageJ over the years, the macros could be greatly simplified.
http://cammer.net/aecom/annuli/index.htmUser: aecom
Pwd: newpassword
Selected Annulus Method Publications:
Bailly M, Macaluso F, Cammer M, Chan A, Segall JE, Condeelis JS. Relationship between Arp2/3 complex and the barbed ends of actin filaments at the leading edge of carcinoma cells after epidermal growth factor stimulation. J Cell Biol. 1999 Apr 19;145(2):331-45.
DesMarais V, Ichetovkin I, Condeelis J, Hitchcock-DeGregori SE. Spatial regulation of actin dynamics: a tropomyosin-free, actin-rich compartment at the leading edge. J Cell Sci. 2002 Dec 1;115(Pt 23):4649-60.
===========================================================================
Michael Cammer, Microscopy Core & Dustin Lab , Skirball Institute, NYU Langone Medical Center
Cell: 914-309-3270 Lab: 212-263-3208
http://ocs.med.nyu.edu/microscopy &
http://www.med.nyu.edu/skirball-lab/dustinlab/===========================================================================
Michael Cammer, Microscopy Core & Dustin Lab , Skirball Institute, NYU Langone Medical Center
Cell: 914-309-3270 Lab: 212-263-3208
http://ocs.med.nyu.edu/microscopy &
http://www.med.nyu.edu/skirball-lab/dustinlab/-----Original Message-----
From: ImageJ Interest Group [mailto:
[hidden email]] On Behalf Of MartinG
Sent: Tuesday, January 28, 2014 6:07 AM
To:
[hidden email]
Subject: Annular ROI and profile plot
Hi there,
I would like to define annular ROIs with a circular shape. Afterwards I want to plot a profile of the intensity, wich should be the average over the thickness of the ROI (according to the center of the circle). Is there any way to achieve such a plot with ImageJ?
thanks!
Martin
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