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Re: FW: MultipleKymograph Plugin Question (Max v Avg)

Posted by J. Daniel Fenn on Feb 22, 2014; 6:29pm
URL: http://imagej.273.s1.nabble.com/MultipleKymograph-Plugin-Question-Max-v-Avg-tp5004981p5006637.html

Arne,

I wanted to thank you for the useful plugin.  Its been working great for
the past couple months.

Also, today I went to install it on a new computer, and the link
provided returns a 404 error.  I have a copy of the plugin still on a
older computer, but thought I would call your attention to the broken
link in case future users may find the plugin useful.

Thanks again,
-Dan

On 10/02/2013 06:49 AM, Seitz Arne wrote:

> Dear Dan,
>
> please find below the link to the updated version of the Kymograph plugin. This will also allow you to calculate the AVERAGE, MIN and MAX of an extended line.
>
> http://biop.epfl.ch/IP_KYMOGRAPH.html
>
> Do not hesitate to contact me in case of further questions.
>
> Best regards
> Arne
>
>
>> -----Original Message-----
>> From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of J.
>> Daniel Fenn
>> Sent: lundi 30 septembre 2013 15:08
>> To: [hidden email]
>> Subject: MultipleKymograph Plugin Question (Max v Avg)
>>
>> As far as I can tell, the MultipleKymograph plugin generates
>> kymographs using some variation of an averaging technique.  It doesn't
>> seem to be simple averages across a line, it must be doing something
>> more complicated.  But instead, I want to just take the maximum value across the line-width instead.
>>
>> So if a line has a width of 3, instead of taking the ~average of the
>> three, I want the value of the maximum pixel within those three.
>>
>> Am I missing something in the plugin?  Is there a way to do this?  Is
>> there a different plugin?  I've looked and can't find anything.  But
>> the plugin I have does not have any options to choose how to generate
>> the kymograph outside of selecting a line-width.
>>
>> What am I missing with this plugin?  It seems there is a lot that
>> doesn't add up correctly.  Any help would be appreciated.
>>
>> Thanks!
>> -Dan
>>
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