Posted by
dscho on
Feb 23, 2014; 10:12pm
URL: http://imagej.273.s1.nabble.com/Re-fiji-devel-TransformJ-Affine-without-changing-image-size-tp5006642.html
Hi Sam,
On Fri, 21 Feb 2014, Sam Lord wrote:
> (I posted this to the ImageJ list, but then realized it's probably better
> posted here. Sorry.)
Actually, it is not *better*.
As Fiji is a distribution of ImageJ with a couple of plugins, fiji-devel
is an excellent place to discuss the development of that distribution
(i.e. issues regarding fiji-compat or fiji-lib and incompatibilities
between bare-bones ImageJ and Fiji -- which should not exist and therefore
are bugs to be fixed in Fiji) while the ImageJ list is an excellent place
to discuss ImageJ plugins.
For example, the developer of TransformJ is not a member of the fiji-devel
mailing list because he does not develop Fiji. He develops the ImageJ
plugin TransformJ.
> I like being able to use TransformJ Affine to apply an affine matrix to an
> image. However, when I deselect the "Adjust Size to Fit Results" option, it
> returns a blank image (all pixels have value 0). Is it possible to return a
> transformed image with the same dimensions, so I can merge channels with
> another color? (I am using this to manually register color channels.)
That sounds like a bug in TransformJ to me. Do you have a small example image
with a recorded macro demonstrating the bug?
Ciao,
Johannes
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