Re: 3D object counter takes too long
Posted by
Michael Doube-4 on
Mar 13, 2014; 9:34am
URL: http://imagej.273.s1.nabble.com/3D-object-counter-takes-too-long-tp5006896p5006898.html
Dear Xiaoxiong,
Try the Particle Analyser in BoneJ:
http://bonej.org/particlesIt should go quite a bit faster than the naïve implementation in 3D OC (but I'm not sure about 'several seconds': depends on your particles).
Michael
On 13/03/14 04:12, Xiaoxiong Xing wrote:
> Dear ImageJ users,
>
> I am using 3D objects counter to count connected objects in an image stack
> which contains 738 738*738 images. I only ticked Nb of Obj. voxels in 3D OC
> options. However, this plug-in took about half an hour before it can give
> the result. Is this normal?
>
> I also tried the *connected component* Avizo and it only takes several
> seconds to find the connected component.
>
> Sincerely,
> Xiaoxiong
>
> --
> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>
<
http://www.rvc.ac.uk>
This message, together with any attachments, is intended for the stated addressee(s) only and may contain privileged or confidential information. Any views or opinions presented are solely those of the author and do not necessarily represent those of the Royal Veterinary College.
--
ImageJ mailing list:
http://imagej.nih.gov/ij/list.html