Re: Getting the values of a Plot Profile after using peak finder script

Posted by dscho on Mar 26, 2014; 9:55pm
URL: http://imagej.273.s1.nabble.com/Getting-the-values-of-a-Plot-Profile-after-using-peak-finder-script-tp5007094p5007095.html

Hi Burni,

On Wed, 26 Mar 2014, Burni wrote:

> I am using the peak finding tool of Tiago Ferreira written in Beanshell
> (http://fiji.sc/Find_Peaks).
> I exported it as a .jar so that I can access it from the addon menu.

No need. You can put the Find_Peaks.bsh file directly into the plugins/
directory.

> The problem I have is that I want to get the actual maxima and minima values
> automatically with a Macro.

If you want to do sophisticated things, the Macro language is probably not
the way to go. Since you already have a Beanshell script, why not modify
this?

Ciao,
Johannes

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html