Login  Register

Re: How to use Stack_Manipulation package within a plugin

Posted by Herbie-3 on Apr 20, 2014; 3:37pm
URL: http://imagej.273.s1.nabble.com/How-to-use-Stack-Manipulation-package-within-a-plugin-tp5007368p5007372.html

Matt,

of course it should be called by IJ.run...

But anyway, if you can call the PlugIn from the plugins folder, then in
general you may call it from your PlugIn by

        IJ.run( imp, "Stack Manipulation", etc. etc." );

HTH

Herbie

On 20.04.14 17:01, Herbie wrote:

> Sorry Matt,
>
> I can't say anything about FIJI.
>
> In ImageJ I find the operation "Make Substack" that obviously does less
> than you've mentioned. It can be called by
>
>      run("Make Substack...", "  slices=3-4");
>
> If you call it several times with the appropriately chosen slices it
> should perform what you desire -- no?
>
> HTH
>
> Herbie
>
> ::::::::::::::::::::::::::::::::::::::
> On 20.04.14 16:38, Matt Pearson wrote:
>> Hi Herbie,
>>
>> I should have said, i'm using FIJI and in the Image menu is
>> >Stacks>Tools>Stack Splitter
>>
>> This can divide a stack into a number of sub-stacks, so if i had 10
>> images in the stack i could divide it by 5 to make 5 stacks of 2
>> images.  So i'd like to use this stack splitter function from within
>> my plugin but not sure how to run it.  In the plugins folder its
>> called Stack_Manipulation.jar.
>>
>> I should also say that i'm new to JAVA plugins, i've been sticking
>> with the macro language up to now.
>>
>> Thanks,
>>
>> Matt
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html