Re: problem with today's release?

Posted by Douglas Richardson on May 08, 2014; 1:51pm
URL: http://imagej.273.s1.nabble.com/problem-with-today-s-release-tp5007629p5007630.html

Here's a quick fix I received from Johannes this morning:

Johannes Schindelin <[hidden email]> changed bug
742<http://fiji.sc/bugzilla/show_bug.cgi?id=742>
 What Removed Added  CC   [hidden email]

 *Comment # 1 <http://fiji.sc/bugzilla/show_bug.cgi?id=742#c1> on bug 742
<http://fiji.sc/bugzilla/show_bug.cgi?id=742> from Johannes Schindelin
<[hidden email]> *

This is caused by some version skew. To work around until the time when I can
fix it (I am transiting all day, so I cannot do it today), please
downloadhttps://oss.sonatype.org/service/local/artifact/maven/redirect?r=releases&g=org.scijava&a=scijava-common&v=2.18.1&e=jar
into your Fiji.app/jars/ directory and delete the scijava-common-2.9.0.jar that
is there already.

Sorry for the inconvenience.




On Thu, May 8, 2014 at 9:26 AM, Kenneth Sloan <[hidden email]>wrote:

> I just accepted the latest update and am now having difficulties with
> locally written
> plugins.  Here’s an example of the exception I get when trying to either
> run an installed
> plugin or “compile-and-run” from source.
>
> (Fiji Is Just) ImageJ 1.48v; Java 1.6.0_65 [64-bit]; Mac OS X 10.9.2; 46MB
> of 4783MB (<1%)
>
> java.lang.NoClassDefFoundError: org/scijava/util/LineOutputStream
>         at java.lang.ClassLoader.defineClass1(Native Method)
>         at java.lang.ClassLoader.defineClassCond(ClassLoader.java:637)
>         at java.lang.ClassLoader.defineClass(ClassLoader.java:621)
>         at
> java.security.SecureClassLoader.defineClass(SecureClassLoader.java:141)
>         at java.net.URLClassLoader.defineClass(URLClassLoader.java:283)
>         at java.net.URLClassLoader.access$000(URLClassLoader.java:58)
>         at java.net.URLClassLoader$1.run(URLClassLoader.java:197)
>         at java.security.AccessController.doPrivileged(Native Method)
>         at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
>         at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
>         at java.lang.ClassLoader.loadClass(ClassLoader.java:247)
>         at
> fiji.scripting.java.PlugInExecutor.<init>(PlugInExecutor.java:55)
>         at
> fiji.scripting.java.PlugInExecutor.<init>(PlugInExecutor.java:50)
>         at
> fiji.scripting.java.Refresh_Javas.runOutOfTreePlugin(Refresh_Javas.java:435)
>         at
> fiji.scripting.java.Refresh_Javas.compileAndRun(Refresh_Javas.java:122)
>         at
> fiji.scripting.java.Refresh_Javas.runScript(Refresh_Javas.java:71)
>         at common.RefreshScripts.run(RefreshScripts.java:287)
>         at fiji.scripting.java.Refresh_Javas.run(Refresh_Javas.java:61)
>         at ij.IJ.runUserPlugIn(IJ.java:199)
>         at ij.IJ.runPlugIn(IJ.java:163)
>         at ij.IJ.runPlugIn(IJ.java:152)
>         at fiji.Compile_and_Run.run(Compile_and_Run.java:25)
>         at ij.IJ.runUserPlugIn(IJ.java:199)
>         at ij.IJ.runPlugIn(IJ.java:163)
>         at ij.Executer.runCommand(Executer.java:131)
>         at ij.Executer.run(Executer.java:64)
>         at java.lang.Thread.run(Thread.java:695)
> Caused by: java.lang.ClassNotFoundException:
> org.scijava.util.LineOutputStream
>         at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
>         at java.security.AccessController.doPrivileged(Native Method)
>         at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
>         at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
>         at java.lang.ClassLoader.loadClass(ClassLoader.java:247)
>         ... 27 more
>
> --
> Kenneth Sloan
> [hidden email]
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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