Re: Need help with a macro for changing channels and colors in the "run("Arrange Channels...");" function.

Posted by Kenton Arkill on May 25, 2014; 11:54am
URL: http://imagej.273.s1.nabble.com/Need-help-with-a-macro-for-changing-channels-and-colors-in-the-run-Arrange-Channels-function-tp5007906p5007909.html

Can't check here about arrange channels, but I normally use merge and split
for similar work. The names aways end in different letters after the split
(so if(endswith()) is useful).
Regards
Kenton


On 24 May 2014 22:35, MrScientistman2 <[hidden email]> wrote:

> Hi all,
>
> Im trying to set up a macro that automatically assigns either of the RGB
> colors (according to my specific needs) to the various channels in a
> confocal-stack (with 3 channels). I can do this perfectly well manually
> with
> the Image->Color->Arrange Channels tool, but would like to program it to a
> macro. Ive tried to manipulate the "run("Arrange Channels...");" command
> but
> I dont know if it can do what im looking for.
>
> What I want: Assign red to channel 1, green to channel 2, and blue to
> channel 3, and at a later point leave red at channel 1, move the blue
> channel to channel 2 and make it green, and move the green (old channel 2)
> to channel 3 and make it blue. Are there any options embedded in this
> function that would do such a thing? Or are there any other solutions?
>
> I hope anyone can help me!
>
>
>
> --
> View this message in context:
> http://imagej.1557.x6.nabble.com/Need-help-with-a-macro-for-changing-channels-and-colors-in-the-run-Arrange-Channels-function-tp5007906.html
> Sent from the ImageJ mailing list archive at Nabble.com.
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html