Posted by
Rebecca Keller on
May 26, 2014; 9:43pm
URL: http://imagej.273.s1.nabble.com/plot-z-axis-broken-tp5007935p5007938.html
Thanks for that tip--it is very good to know how to make the scale absolute.
I am thinking now that there may be a problem with reading the image
headers or something: when I list the plotted values, all of the x-values
are 0, so that's definitely bad. When I write the images out as single
.tifs, then re-read them, the plotter works okay, plots x-axis as "frame"
rather than [sec]. Hmmm. Not sure whether it's the headers or the reading
of the headers.
JPK
On Mon, May 26, 2014 at 4:48 PM, Rasband, Wayne (NIH/NIMH) [E] <
[hidden email]> wrote:
> On May 26, 2014, at 1:42 PM, Rebecca Keller wrote:
>
> > Hi All,
> >
> > For some reason the "plot z-axis" is broken, and I cannot see any trace
> in
> > the plot window. I am thinking it might be a bug in the auto-scaling
> > function of the window, perhaps in the x-dimension. This worked fine
> > before, but I think it broke when I updated imagej or Fiji. More
> generally,
> > is there a way to set the scale in that window manually, or toggle
> various
> > options such as autoscaling versus fixed scaling, etc?
>
> Make sure "Fixed y-axis scale" is unchecked in the Edit>Options>Profile
> Plot Options dialog.
>
> -wayne
>
> > I've tried using old image that used to work, and they no longer do, so
> > it's definitely something wrong with the software. I tried uninstalling
> > then re-installing imagej and Fiji, nothing helped.
> >
> > Hoping there's any easy fix for this...?
> >
> > Jacob
>
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