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Re: Unequal slice distance

Posted by Saalfeld, Stephan on Jun 06, 2014; 1:56pm
URL: http://imagej.273.s1.nabble.com/Unequal-slice-distance-tp5008065p5008070.html

ImageJ does not support non-linear calibration for spatial and temporal
axes.  You can, however, do this in TrakEM2.  As long as you need it for
reconstructing anatomy, this is probably a good idea anyways.  TrakEM2
is part of Fiji:

http://fiji.sc/wiki/index.php/TrakEM2

Best,
Stephan


On Fri, 2014-06-06 at 02:41 -0700, sheldon wrote:

> Hello,
>
> Is there anybody have the experience to set unequal slice distance in
> imagej? As I understand, the voxel depth can only be one value but can not
> be changed slice by slice. Is there a solution for this? Thanks in advance!
>
> Cheers,
> Sheldon
>
>
>
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>
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Stephan Saalfeld, Ph.D.
Group Leader
Janelia Farm Research Campus
19700 Helix Drive | Ashburn, VA 20147
Phone: 571-209-4184 | Fax: 571-209-4946
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