http://imagej.273.s1.nabble.com/Re-Problems-with-added-plugins-after-recent-update-tp5008168p5008177.html
plugins. As far as I can tell, all the .jar plugins I tried were still
working. (e.g. the BioVoxxel plugins don't work, but I could run the SLIM
> On 6/12/14, 8:06 PM, Stoyan Pavlov wrote:
>
>> Hi all,
>> Same here.
>> I was just about to write to the list about the same issues. Problem
>> plugins in my case are the ones from Landini's Morphology package.
>> Stoyan
>>
>> ---
>> Dr. Stoyan P. Pavlov, MD, PhD
>> Departament of Anatomy, Histology and Embryology
>> Medical University "Prof. Dr. Paraskev Stoyanov", Varna
>> Prof. Marin Drinov Str.55
>> 9002 Varna
>> Bulgaria
>> Tel: +359 (0) 52 - 677 - 052
>> e-mail:
[hidden email]
>>
[hidden email]
>>
>>
>> 2014-06-12 17:46 GMT+03:00 AmshaP <
[hidden email]>:
>>
>> Hello,
>>>
>>> Following an update this morning, Fiji does not run the plugins that I
>>> had
>>> once downloaded into the /plugins folder, and I get the error "Plugin or
>>> Class not found" (in this case, for Mexican_Hat_Filter and
>>> MultiStackRegFix
>>> which are both .class files).
>>>
>>> When I install these plugins from Plugins>Install, the Log shows:
>>> "WARNING:
>>> The PluginClassLoader cannot be reset." while a message says the plugin
>>> was
>>> installed correctly; but then I get the same error as above when I try to
>>> run them.
>>>
>>> As these plugins worked well until yesterday and are unrelated, I was
>>> wondering whether the update had modified something which clashes with
>>> exterior plugins...?
>>>
>>> (I have tried re-installing Fiji from the website in case the Updater was
>>> faulty, but the behavior of the re-installed Fiji is the same.)
>>>
>>> Has someone got an idea ?
>>>
>>> Thank you,
>>> Amsha
>>>
>>> PS : I'm not sure this is related, but the icon of ImageJ-win64.exe has
>>> also
>>> changed from the blue FIJI to a black and gold ImageJ logo after the same
>>> update.
>>>
>>>
>>>
>>> --
>>> View this message in context:
>>>
http://imagej.1557.x6.nabble.com/Problems-with-added->>> plugins-after-recent-update-tp5008164.html
>>> Sent from the ImageJ mailing list archive at Nabble.com.
>>>
>>> --
>>>
>>>
> I have also experience some issues associated with updates of Fiji. the
> most serious of which was when the ImageJ window failed to open. Here is
> some of my experience that may be of assistance:
>
> 1. If you can , use the the Fiji Help>Report a Bug . The response from is
> often close to real time.
>
> 2. Many (perhaps all) of the problems seem to be associated with 3rd party
> update sites. Try to limit those to the ones you really need. Apparently
> some of them replace libraries which then cause inconsistency in FIji. I
> found issues with Trackmate, LLTT, and Mosaic.
>
> 3. I use the morphology suite of Gabriel Landini -- so far, no problems
> with it.
>
> 4. I cannot cut and paste out of the recorder on OSX 10.9 (on Linux I
> can). I instead use the "create" button to move the recorder text to a
> script, and cut-and-paste from there. I guess I should report that, but it
> is just a minor annoyance, mac specific, and the support people have enough
> to do.
>
> 5. Make regular backups of your working Fiji.app. Then you can always fall
> back to it without losing your custom configuration.
>
> This is my experience -- I hope it will be of use to others running this
> distribution.
>
> --aryeh
>
> --
> Aryeh Weiss
> Faculty of Engineering
> Bar Ilan University
> Ramat Gan 52900 Israel
>
> Ph: 972-3-5317638
> FAX: 972-3-7384051
>
>
> --
> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>