Login  Register

Re: cannot get timestamps with new Zeiss 700

Posted by ctrueden on Jun 25, 2014; 7:08pm
URL: http://imagej.273.s1.nabble.com/cannot-get-timestamps-with-new-Zeiss-700-tp5008421p5008432.html

Hi Michael,

> when I opened the files there were no metadata for the experiment time
> nor timestamps.

Sounds like an issue with Bio-Formats. Have you considered reporting the
bug to the OME team [1] and sending them a sample image [2]?

Regards,
Curtis

[1]
https://www.openmicroscopy.org/site/support/bio-formats5/about/bug-reporting.html
 [2] http://qa.openmicroscopy.org.uk/qa/upload/



On Wed, Jun 25, 2014 at 9:05 AM, Cammer, Michael <[hidden email]
> wrote:

> For years we have been using the Zeiss 710 for timelapse experiments.
>  When we open the files using the BioFormats importer in ImageJ the
> metadata reports a start time for the experiments and timestamps for each
> timepoint.
>
> Last night I did a timelapse experiment with a new Zeiss 700 and when I
> opened the files there were no metadata for the experiment time nor
> timestamps.  There is, however, a tag that says
> Information|Image|T|BinaryList|AttachmentName| #1               TimeStamps
>
> Does anyone know how we can get the start time and timestamps info?  We
> need both.
>
> Thank you!
>
> ===========================================================================
> Michael Cammer, Microscopy Core & Dustin Lab , Skirball Institute, NYU
> Langone Medical Center
> Cell:  914-309-3270   Lab: 212-263-3208
> http://ocs.med.nyu.edu/microscopy &
> http://www.med.nyu.edu/skirball-lab/dustinlab/
>
> ------------------------------------------------------------
> This email message, including any attachments, is for the sole use of the
> intended recipient(s) and may contain information that is proprietary,
> confidential, and exempt from disclosure under applicable law. Any
> unauthorized review, use, disclosure, or distribution is prohibited. If you
> have received this email in error please notify the sender by return email
> and delete the original message. Please note, the recipient should check
> this email and any attachments for the presence of viruses. The
> organization accepts no liability for any damage caused by any virus
> transmitted by this email.
> =================================
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html