Re: Measuring mulitple species from a single image

Posted by Olivier Burri on Jul 14, 2014; 7:14am
URL: http://imagej.273.s1.nabble.com/Measuring-mulitple-species-from-a-single-image-tp5008690p5008704.html

Dear Gail,

> automate the naming- e.g. have 10 species each assigned to a number key and
> when I press that key it renames the most recent ROI (I'll panic when I go over
> 10 species, but you get the gist). Or- using different colors to highlight the
> different species and then somehow recording the selection color as a column in
> the measurement results (again, export to excel & count colors from there).

This is indeed doable probably but could you provide us with an example image?

The fact that you can use the magic wand sort of hints that a more automatic segmentation could be possible.

All the best

Oli

Olivier Burri
Engineer - Image Processing
& Software Development
EPFL - SV - PTECH - PTBIOP

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