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detection of fatty tissue in HE images

Posted by Marien Koen on Aug 29, 2014; 7:50am
URL: http://imagej.273.s1.nabble.com/detection-of-fatty-tissue-in-HE-images-tp5009413.html

Dear ImageJ mailing list


Currently I'm trying to write an algorithm that can detect fatty tissue in an image of HE stained tissue (examples: https://www.dropbox.com/sh/40unigstsq795tk/AADpFIvIbudvDCJqdNxINa1_a?dl=0).
Making a difference between holes in the tissue and the fatty is not easy.

Can somebody help me with a succesful workflow? With choosing the right filters? Or if you know good literature about this?


Thanks
Koen


ir. Koen Marien

Imaging Scientist, PhD student

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Lab building, 1st floor (campus ZNA Middelheim)

Lindendreef 1, 2020 Antwerpen (Belgium)        Phone: +32 (0)3 218 19 17

https://www.uantwerp.be/en/staff/koen-marien/

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