http://imagej.273.s1.nabble.com/Not-so-easy-ROI-Manager-macro-tp5009440p5009517.html
Jerome.
>
> Dear all,
> I was finally able to write the macro I requested some help for and the
> result is the following:
>
> run("Clear Results");
> for(k = 0; k != roiManager("count"); k++)
> {
> roiManager("select", k);
> Roi.getBounds(x, y, width, height);
> for(i = x; i <= x + width; i++)
> for(j = y; j <= y + height; j++)
> if(selectionContains(i, j))
> {
> nbPixels = nResults;
> setResult("x" , nbPixels, i);
> setResult("Y" , nbPixels, j);
> setResult("index", nbPixels, k);
> }
> }
>
> My problem about developing this macro is that I wasn't aware about the
> "selectionContains(x, y)" function that I was looking for within the "ROI
> Functions".
> My best regards,
> Philippe
>
> On Sep 1, 2014, at 9:23 AM, Philippe CARL wrote:
>
> > Dear all,
> >
> > I have a whole bunch of ROIs saved within the ROI Manager for which I
> > would like to create a macro that creates me a file (or alternatively
> > a results
> > window) containing the x, y positions (2 first columns) of all the
> > pixels within the different ROIs together with a tag (3rd column)
> > referring to the given ROI ID within the ROI Manager (= ROI Name
> > within
> the ROI Manager).
> >
> > You ideas on the best strategies for writing such a macro are more
> > than welcome.
> >
> > Also the link:
> >
> >
http://rsbweb.nih.gov/ij/docs/macros/Roi_Properties_Test.txt> >
> > that is given as example for the getProperty(), setProperty() and
> > getProperties() methods additions of Jérôme on the 1.48h 30 November
> > 2013 update seems to be broken.
> >
> > I thank you very much in advance.
> >
> > My best regards,
> >
> > Philippe
> >
> >
> >
> > Philippe CARL
> >
> > Laboratoire de Biophotonique et Pharmacologie
> >
> > UMR 7213 CNRS - Université de Strasbourg
> >
> > Faculté de Pharmacie
> >
> > 74 route du Rhin
> >
> > 67401 ILLKIRCH
> >
> > Tel : +33(0)3 68 85 41 84
>
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