SCIFO is very slow to import a sequence of stacks

Posted by Leon Espinosa-3 on Sep 08, 2014; 9:09am
URL: http://imagej.273.s1.nabble.com/SCIFO-is-very-slow-to-import-a-sequence-of-stacks-tp5009540.html

Dear developpers, I have a folder with 1442 tif stacks each one composed by 3 slices (500x500 px 16 bits). If I try to import it as a tif sequence I have "measured" these times  :

with ImageJ/IJ1 (1.49 g)
60 sec

with FIJI/IJ1 : (1.49 g)
60 sec

with FIJI/IJ2
with or without "enable imagej2 data structures"
and without "SCFIO" option :

27 sec


with FIJI/IJ2
with or without "enable imagej2 data structures"
WITH "SCFIO" option enable :

8 min 50 sec !!

It seems good news for IJ2 and bad news for SCFIO. Should I report this in Fiji bugzilla ? some SCFIO list ?


Thank you for all you work, and all the best

Leon

System: Mac OS 10.6 10 Gb allowed for memory 16 proc

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