Re: Image set library for image analysis algorithm benchmarking

Posted by ctrueden on Sep 16, 2014; 10:58am
URL: http://imagej.273.s1.nabble.com/Image-set-library-for-image-analysis-algorithm-benchmarking-tp5009567p5009639.html

Hi Lenny,

> I wonder if any of you know of open data sets that contain images of
> cells with various compartments stained (e.g., cytoplasm, nucleus, ER,
> Golgi) which can be used to benchmark image analysis or segmentation
> algorithms?

How about:
http://www.cellimagelibrary.org/

Regards,
Curtis

On Wed, Sep 10, 2014 at 10:47 AM, Leonardo Guizzetti <
[hidden email]> wrote:

> Hello IJ users,
>
> I wonder if any of you know of open data sets that contain images of cells
> with various compartments stained (e.g., cytoplasm, nucleus, ER, Golgi)
> which can be used to benchmark image analysis or segmentation algorithms?
> The purpose of this is to see if there are accepted data standards to use
> for these tasks, prior to testing a particular algorithm against my own
> data.
>
>
> I look forward to your help,
>
> Lenny Guizzetti
>
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> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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