Re: bug siox segmentation?

Posted by Ignacio Arganda-Carreras on Sep 25, 2014; 4:07pm
URL: http://imagej.273.s1.nabble.com/bug-siox-segmentation-tp5009745p5009771.html

Please, update Fiji, I just released a version that fix the bug.

Cheers!

ignacio

On Wed, Sep 24, 2014 at 2:18 PM, Ignacio Arganda-Carreras <
[hidden email]> wrote:

> Hello Anett,
>
> Did you select the "Allow multiple foreground components" option in the
> GUI?
>
> This is somehow a bug, because when you applied the saved segmentator it
> looks for multiple foreground objects even if you didn't want to.
>
> ignacio
>
> On Wed, Sep 24, 2014 at 12:58 PM, Anett Jannasch <
> [hidden email]> wrote:
>
>> hi,
>>
>> I have problems using the siox plugin. The mask I create and save based
>> on my RGB picture is not the same (result is different) when i apply this
>> mask to this RGB picture. Has anyone an idea or observed similar problems?
>>
>> picture and wrong masks you can find here:
>>
>> https://www.dropbox.com/s/jct64wudgbxxcoc/Fiji%20siox%20bug.pptx?dl=0
>> https://www.dropbox.com/s/daew3gbhfnpp10m/G23_1_SMA_1_800_250613a.zvi?dl=0
>>
>> thank you in advance
>>
>> anett
>>
>> --
>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>>
>
>
>
> --
> Ignacio Arganda-Carreras, Ph.D.
> Seung's lab, 46-5065
> Department of Brain and Cognitive Sciences
> Massachusetts Institute of Technology
> 43 Vassar St.
> Cambridge, MA 02139
> USA
>
> Phone: [phone]
> Website: http://bioweb.cnb.csic.es/~iarganda/index_EN.html
>

--
Ignacio Arganda-Carreras, Ph.D.
Seung's lab, 46-5065
Department of Brain and Cognitive Sciences
Massachusetts Institute of Technology
43 Vassar St.
Cambridge, MA 02139
USA

Phone: [phone]
Website: http://bioweb.cnb.csic.es/~iarganda/index_EN.html

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html