Re: BoneJ Analyze Skeleton on Skeletons with >32766 components?

Posted by Ignacio Arganda-Carreras on
URL: http://imagej.273.s1.nabble.com/BoneJ-Analyze-Skeleton-on-Skeletons-with-32766-components-tp5009924p5010008.html

No problem. Thank you for reporting!

On Mon, Oct 13, 2014 at 11:34 AM, Simon Carr <[hidden email]> wrote:

> Dear Ignacio,
>
> This is fantastic, THANK-YOU! I'm in the middle of writing a paper at the
> moment, but I will download the update later today and see how it gets on.
>
> However, thank-you so much for being so responsive and updating the code
> so rapidly: it is very much appreciated.
>
> Regards,
>
> Simon
>
> Dr Simon Carr
> School of Geography
> Queen Mary University of London
> Mile End Road
> London E1 4NS
> T: 020 7882 2780
> F:
> Twitter: @drsimoncarr
>
> > On 13 Oct 2014, at 10:13, Ignacio Arganda-Carreras <
> [hidden email]> wrote:
> >
> > OK, I have just updated the code so the labels are integers (converted to
> > floats). You can get the latest release by updating Fiji or downloading
> the
> > jar from here:
> >
> > https://github.com/fiji/AnalyzeSkeleton/releases/tag/v2.0.1
> >
> > Cheers!
> >
> >> On Wed, Oct 8, 2014 at 9:46 AM, Karsten <[hidden email]> wrote:
> >>
> >> The problem with unique integers represented as float numbers starts
> much
> >> earlier. You should not have more than 5 decimals at maximum to be sure
> not
> >> to have mix-ups of labels. The problem is that there is always a
> conversion
> >> from float to int using numbers as labels!
> >> Karsten
> >>
> >>> Am 08.10.2014 um 00:34 schrieb Doube, Michael <[hidden email]>:
> >>>
> >>> integers above 2^24 (a bit more than 16 million) are
> >>> not precisely represented by float. See e.g. this:
> >>>
> >>> http://www.ibm.com/developerworks/java/library/j-math2/index.html
> >>
> >> --
> >> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> >>
> >
> >
> >
> > --
> > Ignacio Arganda-Carreras, Ph.D.
> > Seung's lab, 46-5065
> > Department of Brain and Cognitive Sciences
> > Massachusetts Institute of Technology
> > 43 Vassar St.
> > Cambridge, MA 02139
> > USA
> >
> > Phone: (001) 617-324-3747
> > Website: http://bioweb.cnb.csic.es/~iarganda/index_EN.html
> >
> > --
> > ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>



--
Ignacio Arganda-Carreras, Ph.D.
Seung's lab, 46-5065
Department of Brain and Cognitive Sciences
Massachusetts Institute of Technology
43 Vassar St.
Cambridge, MA 02139
USA

Phone: (001) 617-324-3747
Website: http://bioweb.cnb.csic.es/~iarganda/index_EN.html

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html