Posted by
Judit Pampalona on
Oct 15, 2014; 10:23am
URL: http://imagej.273.s1.nabble.com/I-cannot-open-lif-files-from-the-SP8-confocal-in-Fiji-tp5010050.html
Hello all,
I would be very grateful if someone can help me with this issue. When I try
to open a lif file obtained from an SP8 confocal by dragging the file to
the fiji barr, it appears the following message :
"File is not in a supported format, a reader plugin is not available, or it
was not found"
When I try to import the very same file using the File<import<Bioformats ,
viewing as Hyperstack, it opens a log window with the following text:
loci.formats.FormatException: Invalid Memory Block: found magic bytes 0,
expected 112
at loci.formats.in.LIFReader.initFile(LIFReader.java:412)
at loci.formats.FormatReader.setId(FormatReader.java:1183)
at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:482)
at loci.plugins.in.ImportProcess.execute(ImportProcess.java:146)
at loci.plugins.in.Importer.showDialogs(Importer.java:141)
at loci.plugins.in.Importer.run(Importer.java:79)
at loci.plugins.LociImporter.run(LociImporter.java:81)
at ij.IJ.runUserPlugIn(IJ.java:202)
at ij.IJ.runPlugIn(IJ.java:166)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at ij.Command.runPlugIn(Command.java:148)
at ij.Command.runCommand(Command.java:97)
at ij.Executer.run(Executer.java:64)
at java.lang.Thread.run(Thread.java:662)
Then I tried to update the LOCI plugins (the three options) and it says
every time that there is an error when trying to install them.
My version of Fiji is v1.49i, do you know how to solve this?
Thanks in advance,
Judit
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