Re: IJ Color Thresholding in Macro

Posted by Gabriel Landini on Dec 05, 2014; 8:53am
URL: http://imagej.273.s1.nabble.com/IJ-Color-Thresholding-in-Macro-tp5010727p5010777.html

On Thursday 04 Dec 2014 12:59:34 you wrote:
> One thing I just noticed is the Overlay Outlines created in Analyze
> Particles doesn't transfer to the combined image after the Image Calculator
> routine. (see attached pics) Is there any way to combine them & keep the
> outline overlay? like with ImagePro you can burn the overlay into the image
> so it's part of the picture.

I do not use ImagePro, so I do not know.
If it is the ROI that you are missing, perhaps look into the macro functions
for "Restore ROI". I am not sure what is that you are intending to do and this
is getting complicated to follow because this is not the way that the plugins
were intended to be used, but to make the process as automated as possible
without user interaction.

Cheers

Gabriel

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