Re: frequency histogram for diffusion analysis

Posted by Gabriel Landini on Dec 12, 2014; 9:30am
URL: http://imagej.273.s1.nabble.com/frequency-histogram-for-diffusion-analysis-tp5010919p5010922.html

On Thursday 11 Dec 2014 18:02:51 Adam Huttenlocker wrote:
> Does anyone know of a script or protocol for producing a histogram of the
> shortest distances between particle centroids and, say, 100
> randomly-generated particles in the intervening space? I

I think you can get that from the distribution of edges of the Minimal
Spanning Tree graph. There was a plugin to compute the MST posted recently.

http://imagejdocu.tudor.lu/doku.php?id=plugin:morphology:euclidean_minimum_spanning_tree:start

Regards

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